newb file placement question

so I made a flash file for my homepage.  questions....

 when a project is published, do I upload all the various files that Flash 
makes into the same folder on my server?  
 are there seperate folders that each specific file should be in?
 should the pathway be domain name folder and then the html folder?
 since this will be the first page it should be named index correct?

1 & 2) Thats your choice, though keeping files in corresponding folder makes

site maintenance and further development easier. For example you can create 
separate folders for flash movies, images, js, ...

 3) If the pathname is absolute then the domain name should be included, but 
there's no need for that since all is on the same server. For relative pathname

you then use just files and folders if there is any between current and page 
and target.

 4) If it should be named index depends on the server configuration in most 
cases that is index as you said.